Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.19■□□□□ 0.18
Clcn6O35454 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC16.19■□□□□ 0.18
Clcn6O35454 Gm17808-201ENSMUST00000200859 894 ntBASIC16.19■□□□□ 0.18
Clcn6O35454 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC16.19■□□□□ 0.18
Clcn6O35454 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Clcn6O35454 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Clcn6O35454 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clcn6O35454 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.18■□□□□ 0.18
Clcn6O35454 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Clcn6O35454 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC16.18■□□□□ 0.18
Clcn6O35454 Gm22764-201ENSMUST00000158370 92 ntBASIC16.18■□□□□ 0.18
Clcn6O35454 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC16.18■□□□□ 0.18
Clcn6O35454 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Gm8502-201ENSMUST00000185708 901 ntBASIC16.18■□□□□ 0.18
Clcn6O35454 Gm8510-201ENSMUST00000189202 895 ntBASIC16.18■□□□□ 0.18
Clcn6O35454 Gm2316-201ENSMUST00000190613 921 ntBASIC16.18■□□□□ 0.18
Clcn6O35454 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.18■□□□□ 0.18
Clcn6O35454 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clcn6O35454 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Clcn6O35454 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn6O35454 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.17■□□□□ 0.18
Clcn6O35454 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 AC140393.3-201ENSMUST00000228396 1352 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.17■□□□□ 0.18
Clcn6O35454 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Clcn6O35454 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Gm15719-201ENSMUST00000120619 635 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Gm11950-201ENSMUST00000121615 838 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC16.17■□□□□ 0.18
Clcn6O35454 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Gm22588-201ENSMUST00000157510 140 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Gm16147-201ENSMUST00000162143 373 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Clcn6O35454 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Gm13147-202ENSMUST00000177526 1173 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Gm28450-201ENSMUST00000187349 638 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC16.17■□□□□ 0.18
Clcn6O35454 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Clcn6O35454 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.17■□□□□ 0.18
Clcn6O35454 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Clcn6O35454 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Clcn6O35454 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn6O35454 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Clcn6O35454 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn6O35454 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn6O35454 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn6O35454 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn6O35454 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn6O35454 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Clcn6O35454 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn6O35454 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn6O35454 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Clcn6O35454 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms