Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.59□□□□□ -0.55
Tnfsf11O35235 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfsf11O35235 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfsf11O35235 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Tnfsf11O35235 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.58□□□□□ -0.56
Tnfsf11O35235 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Gm10013-201ENSMUST00000106074 672 ntBASIC11.58□□□□□ -0.56
Tnfsf11O35235 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tnfsf11O35235 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Gm9013-201ENSMUST00000132939 882 ntBASIC11.57□□□□□ -0.56
Tnfsf11O35235 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf11O35235 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.56□□□□□ -0.56
Tnfsf11O35235 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.56□□□□□ -0.56
Tnfsf11O35235 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Gm9172-201ENSMUST00000212092 954 ntBASIC11.56□□□□□ -0.56
Tnfsf11O35235 Celf4-206ENSMUST00000224553 1729 ntBASIC11.56□□□□□ -0.56
Tnfsf11O35235 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms