Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NpcdF8VQB8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Mir1897-201ENSMUST00000122581 272 ntBASIC17.78■□□□□ 0.44
NpcdF8VQB8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.78■□□□□ 0.44
NpcdF8VQB8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.78■□□□□ 0.44
NpcdF8VQB8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Gm11425-201ENSMUST00000119608 498 ntBASIC17.77■□□□□ 0.44
NpcdF8VQB8 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.77■□□□□ 0.44
NpcdF8VQB8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Gm9396-201ENSMUST00000076703 567 ntBASIC17.77■□□□□ 0.44
NpcdF8VQB8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NpcdF8VQB8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
NpcdF8VQB8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NpcdF8VQB8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NpcdF8VQB8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
NpcdF8VQB8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.77■□□□□ 0.43
NpcdF8VQB8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Gm12742-201ENSMUST00000117326 410 ntBASIC17.76■□□□□ 0.43
NpcdF8VQB8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.76■□□□□ 0.43
NpcdF8VQB8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.76■□□□□ 0.43
NpcdF8VQB8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Gm9522-201ENSMUST00000182394 926 ntBASIC17.76■□□□□ 0.43
NpcdF8VQB8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NpcdF8VQB8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.75■□□□□ 0.43
NpcdF8VQB8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Gm45331-201ENSMUST00000209868 554 ntBASIC17.75■□□□□ 0.43
NpcdF8VQB8 Gm5035-201ENSMUST00000215581 927 ntBASIC17.75■□□□□ 0.43
NpcdF8VQB8 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.75■□□□□ 0.43
NpcdF8VQB8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms