Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15□□□□□ -0.01
Col4a6B1AVK5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm7446-201ENSMUST00000221035 1240 ntBASIC15□□□□□ -0.01
Col4a6B1AVK5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15□□□□□ -0.01
Col4a6B1AVK5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col4a6B1AVK5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col4a6B1AVK5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15□□□□□ -0.01
Col4a6B1AVK5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15□□□□□ -0.01
Col4a6B1AVK5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm15957-201ENSMUST00000118893 974 ntBASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm6244-201ENSMUST00000178732 841 ntBASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm21470-201ENSMUST00000187680 696 ntBASIC15□□□□□ -0.01
Col4a6B1AVK5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15□□□□□ -0.01
Col4a6B1AVK5 AC110817.1-201ENSMUST00000225706 605 ntBASIC15□□□□□ -0.01
Col4a6B1AVK5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Gm45331-201ENSMUST00000209868 554 ntBASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a6B1AVK5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Gm18307-201ENSMUST00000206864 949 ntBASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a6B1AVK5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Gm27839-201ENSMUST00000184242 106 ntBASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a6B1AVK5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms