Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Shroom2A2ALU4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Gm44985-201ENSMUST00000206202 1016 ntBASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Gm18473-201ENSMUST00000220543 868 ntBASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom2A2ALU4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Gm1335-201ENSMUST00000121653 386 ntBASIC22.9■■□□□ 1.26
Shroom2A2ALU4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Gm8810-201ENSMUST00000172895 754 ntBASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Gm4271-201ENSMUST00000174444 973 ntBASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Snora73a-201ENSMUST00000082453 205 ntBASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom2A2ALU4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
Shroom2A2ALU4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Shroom2A2ALU4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Shroom2A2ALU4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Shroom2A2ALU4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Gm25668-201ENSMUST00000157700 129 ntBASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Shroom2A2ALU4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 AC139350.3-201ENSMUST00000226151 420 ntBASIC22.88■■□□□ 1.25
Shroom2A2ALU4 AC123645.1-201ENSMUST00000228469 605 ntBASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom2A2ALU4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Gm20482-202ENSMUST00000174729 825 ntBASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Gm43094-201ENSMUST00000196549 921 ntBASIC22.87■■□□□ 1.25
Shroom2A2ALU4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom2A2ALU4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Ankra2-208ENSMUST00000226100 1476 ntBASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Gm42997-202ENSMUST00000200321 985 ntBASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 AC154595.3-201ENSMUST00000224579 384 ntBASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms