Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Gm15653-201ENSMUST00000119247 907 ntBASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.39□□□□□ -0.11
Col9a3A2ACT7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a3A2ACT7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Gm12091-201ENSMUST00000146791 830 ntBASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Gm43433-201ENSMUST00000196573 481 ntBASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Gm45384-201ENSMUST00000210451 277 ntBASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Gm25857-201ENSMUST00000082788 129 ntBASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a3A2ACT7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Gm3436-201ENSMUST00000179930 840 ntBASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Gm10766-202ENSMUST00000194123 606 ntBASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Gm45453-201ENSMUST00000211758 853 ntBASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a3A2ACT7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms