Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.17□□□□□ -0.46
Trav18A0A075B656 Gm9682-201ENSMUST00000197505 556 ntBASIC12.17□□□□□ -0.46
Trav18A0A075B656 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.16□□□□□ -0.46
Trav18A0A075B656 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Gm43347-201ENSMUST00000200226 580 ntBASIC12.16□□□□□ -0.46
Trav18A0A075B656 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.16□□□□□ -0.46
Trav18A0A075B656 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav18A0A075B656 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.15□□□□□ -0.46
Trav18A0A075B656 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Gm23547-201ENSMUST00000158210 271 ntBASIC12.15□□□□□ -0.46
Trav18A0A075B656 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.15□□□□□ -0.46
Trav18A0A075B656 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav18A0A075B656 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms