Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Gm13597-201ENSMUST00000121239 375 ntBASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Gm2272-201ENSMUST00000194903 582 ntBASIC14.84□□□□□ -0.03
H2afb2S4R1M3 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb2S4R1M3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb2S4R1M3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb2S4R1M3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb2S4R1M3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
H2afb2S4R1M3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb2S4R1M3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb2S4R1M3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb2S4R1M3 Carlr-201ENSMUST00000181515 2574 ntBASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Gm14140-201ENSMUST00000119999 995 ntBASIC14.82□□□□□ -0.04
H2afb2S4R1M3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms