Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Gm13453-201ENSMUST00000118708 357 ntBASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Gm27618-201ENSMUST00000183671 60 ntBASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Gm28630-201ENSMUST00000187806 498 ntBASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarcb1Q9Z0H3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Gm27306-201ENSMUST00000183970 107 ntBASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcb1Q9Z0H3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Gm9726-201ENSMUST00000180321 678 ntBASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Olfr286-202ENSMUST00000205305 969 ntBASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms