Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Carlr-201ENSMUST00000181515 2574 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44357-201ENSMUST00000195897 142 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm19658-201ENSMUST00000196231 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44367-201ENSMUST00000196836 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44350-201ENSMUST00000197197 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44390-201ENSMUST00000197533 144 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44313-201ENSMUST00000198018 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44486-201ENSMUST00000198508 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44314-201ENSMUST00000199263 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44394-201ENSMUST00000199558 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44484-201ENSMUST00000199873 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44466-201ENSMUST00000200264 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm44359-201ENSMUST00000200671 138 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccl28Q9JIL2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 AC151836.1-202ENSMUST00000226259 753 ntBASIC12□□□□□ -0.49
Ccl28Q9JIL2 AC154757.1-201ENSMUST00000228289 336 ntBASIC12□□□□□ -0.49
Ccl28Q9JIL2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl28Q9JIL2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl28Q9JIL2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl28Q9JIL2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms