Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 AC102291.3-201ENSMUST00000226566 405 ntBASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Gm2423-201ENSMUST00000074863 733 ntBASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf1Q9EPU4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Gm4081-201ENSMUST00000195287 1838 ntBASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cpsf1Q9EPU4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Gm5866-201ENSMUST00000177881 973 ntBASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Gm45751-201ENSMUST00000210185 1573 ntBASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Gm5763-201ENSMUST00000155951 1530 ntBASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf1Q9EPU4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Mir125a-201ENSMUST00000083545 68 ntBASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf1Q9EPU4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms