Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm44487-201ENSMUST00000205145 325 ntBASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssbp3Q9D032 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Gm45612-201ENSMUST00000211320 160 ntBASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Chchd1-203ENSMUST00000224633 557 ntBASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp3Q9D032 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp3Q9D032 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp3Q9D032 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Ssbp3Q9D032 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms