Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc3Q9CWU5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc3Q9CWU5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Khdc3Q9CWU5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc3Q9CWU5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Gm18733-201ENSMUST00000173950 856 ntBASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc3Q9CWU5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm27300-201ENSMUST00000184085 97 ntBASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm27335-201ENSMUST00000184758 97 ntBASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm43767-201ENSMUST00000198933 381 ntBASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc3Q9CWU5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms