Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smc3Q9CW03 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.48■□□□□ 0.39
Smc3Q9CW03 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.48■□□□□ 0.39
Smc3Q9CW03 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc3Q9CW03 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Gm23547-201ENSMUST00000158210 271 ntBASIC17.47■□□□□ 0.39
Smc3Q9CW03 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Gm7977-201ENSMUST00000193787 748 ntBASIC17.47■□□□□ 0.39
Smc3Q9CW03 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.47■□□□□ 0.39
Smc3Q9CW03 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.47■□□□□ 0.39
Smc3Q9CW03 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.47■□□□□ 0.39
Smc3Q9CW03 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.46■□□□□ 0.39
Smc3Q9CW03 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.46■□□□□ 0.39
Smc3Q9CW03 Gm34391-201ENSMUST00000203706 907 ntBASIC17.46■□□□□ 0.39
Smc3Q9CW03 Birc2-201ENSMUST00000054878 378 ntBASIC17.46■□□□□ 0.39
Smc3Q9CW03 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc3Q9CW03 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smc3Q9CW03 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc3Q9CW03 Gm7222-201ENSMUST00000117512 906 ntBASIC17.45■□□□□ 0.38
Smc3Q9CW03 Gm12008-201ENSMUST00000117791 755 ntBASIC17.45■□□□□ 0.38
Smc3Q9CW03 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 125.2 ms