Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nipsnap3bQ9CQE1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm28033-201ENSMUST00000184224 96 ntBASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nipsnap3bQ9CQE1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm43767-201ENSMUST00000198933 381 ntBASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms