Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Gm12008-201ENSMUST00000117791 755 ntBASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Gm45167-201ENSMUST00000208007 322 ntBASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 AV026068-213ENSMUST00000223675 1171 ntBASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb1Q9CQ70 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb1Q9CQ70 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb1Q9CQ70 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb1Q9CQ70 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.15□□□□□ -0.47
H2afb1Q9CQ70 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb1Q9CQ70 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.15□□□□□ -0.47
H2afb1Q9CQ70 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb1Q9CQ70 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Gm18246-201ENSMUST00000221023 728 ntBASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb1Q9CQ70 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms