Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.05□□□□□ -0.16
Use1Q9CQ56 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.05□□□□□ -0.16
Use1Q9CQ56 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Gm18489-201ENSMUST00000172565 551 ntBASIC14.05□□□□□ -0.16
Use1Q9CQ56 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Use1Q9CQ56 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Use1Q9CQ56 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.04□□□□□ -0.16
Use1Q9CQ56 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.04□□□□□ -0.16
Use1Q9CQ56 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.04□□□□□ -0.16
Use1Q9CQ56 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Gm43767-201ENSMUST00000198933 381 ntBASIC14.04□□□□□ -0.16
Use1Q9CQ56 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.04□□□□□ -0.16
Use1Q9CQ56 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Use1Q9CQ56 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.03□□□□□ -0.16
Use1Q9CQ56 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.03□□□□□ -0.16
Use1Q9CQ56 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Use1Q9CQ56 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Use1Q9CQ56 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Use1Q9CQ56 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.02□□□□□ -0.16
Use1Q9CQ56 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Use1Q9CQ56 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Use1Q9CQ56 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms