Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gm11950-201ENSMUST00000121615 838 ntBASIC13.13□□□□□ -0.31
Chmp1aQ921W0 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1aQ921W0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Gm6345-202ENSMUST00000180900 204 ntBASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Carlr-201ENSMUST00000181515 2574 ntBASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp1aQ921W0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Chmp1aQ921W0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Chmp1aQ921W0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1aQ921W0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1aQ921W0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1aQ921W0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.11□□□□□ -0.31
Chmp1aQ921W0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms