Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Gm7230-201ENSMUST00000173026 815 ntBASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Gm7787-201ENSMUST00000216858 688 ntBASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga11Q91XY8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Gm5682-201ENSMUST00000173402 505 ntBASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Gm10060-201ENSMUST00000212002 111 ntBASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga11Q91XY8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Mir5131-201ENSMUST00000175426 93 ntBASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Gm43767-201ENSMUST00000198933 381 ntBASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms