Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb11Q91UZ8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb11Q91UZ8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb11Q91UZ8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Pcdhb11Q91UZ8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb11Q91UZ8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb11Q91UZ8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Gm16026-204ENSMUST00000162652 683 ntBASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb11Q91UZ8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Gm4995-201ENSMUST00000117247 432 ntBASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb11Q91UZ8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Efs-202ENSMUST00000227037 2540 ntBASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Gm15427-201ENSMUST00000117288 531 ntBASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.18■□□□□ 0.02
Pcdhb11Q91UZ8 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms