Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Rpph1-201ENSMUST00000175096 319 ntBASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Gm43575-201ENSMUST00000196420 516 ntBASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rprd1aQ8VDS4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rprd1aQ8VDS4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Gm16026-204ENSMUST00000162652 683 ntBASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.27■□□□□ 0.04
Rprd1aQ8VDS4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rprd1aQ8VDS4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Gm27494-201ENSMUST00000184735 189 ntBASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms