Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.04■□□□□ -0
Slf1Q8R3P9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slf1Q8R3P9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Slf1Q8R3P9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Slf1Q8R3P9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Slf1Q8R3P9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Slf1Q8R3P9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.03■□□□□ -0
Slf1Q8R3P9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Slf1Q8R3P9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Slf1Q8R3P9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.03■□□□□ -0
Slf1Q8R3P9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Slf1Q8R3P9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Slf1Q8R3P9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Gm6257-201ENSMUST00000163864 910 ntBASIC15.02■□□□□ -0
Slf1Q8R3P9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Slf1Q8R3P9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.02■□□□□ -0
Slf1Q8R3P9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slf1Q8R3P9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.02■□□□□ -0
Slf1Q8R3P9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Slf1Q8R3P9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Gm27742-201ENSMUST00000184667 60 ntBASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slf1Q8R3P9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms