Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Trim29Q8R2Q0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim29Q8R2Q0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim29Q8R2Q0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim29Q8R2Q0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.96■□□□□ 0.3
Trim29Q8R2Q0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim29Q8R2Q0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim29Q8R2Q0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim29Q8R2Q0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Gm14140-201ENSMUST00000119999 995 ntBASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim29Q8R2Q0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms