Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Gm23547-201ENSMUST00000158210 271 ntBASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Gm4899-201ENSMUST00000178708 719 ntBASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Mir8098-201ENSMUST00000184011 137 ntBASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cchcr1Q8K2I2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cchcr1Q8K2I2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Gm11452-201ENSMUST00000122376 690 ntBASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cchcr1Q8K2I2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms