Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Gm13884-201ENSMUST00000118103 829 ntBASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Gm5864-201ENSMUST00000202263 970 ntBASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc38Q8CDN8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Gm13036-201ENSMUST00000117799 748 ntBASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc38Q8CDN8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc38Q8CDN8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Gm23547-201ENSMUST00000158210 271 ntBASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc38Q8CDN8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms