Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Gm15321-201ENSMUST00000121290 288 ntBASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Gm6745-201ENSMUST00000199216 526 ntBASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Gm6912-201ENSMUST00000117218 544 ntBASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ptcd1Q8C2E4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Gm23984-201ENSMUST00000157139 203 ntBASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 BC037039-201ENSMUST00000192003 2205 ntBASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ptcd1Q8C2E4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ptcd1Q8C2E4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms