Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Gm13223-201ENSMUST00000118609 747 ntBASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Gm17837-201ENSMUST00000186435 985 ntBASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Gm5479-201ENSMUST00000160578 435 ntBASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Gm27321-201ENSMUST00000185021 205 ntBASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Gm18766-201ENSMUST00000189811 808 ntBASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.02■□□□□ -0
Sh3rf2Q8BZT2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf2Q8BZT2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf2Q8BZT2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Sh3rf2Q8BZT2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf2Q8BZT2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.02□□□□□ -0.01
Sh3rf2Q8BZT2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf2Q8BZT2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf2Q8BZT2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf2Q8BZT2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf2Q8BZT2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms