Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Usp47Q8BY87 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp47Q8BY87 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp47Q8BY87 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC20.9■□□□□ 0.94
Usp47Q8BY87 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp47Q8BY87 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usp47Q8BY87 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usp47Q8BY87 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usp47Q8BY87 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp47Q8BY87 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp47Q8BY87 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC20.89■□□□□ 0.94
Usp47Q8BY87 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Usp47Q8BY87 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC20.89■□□□□ 0.94
Usp47Q8BY87 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Usp47Q8BY87 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp47Q8BY87 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Usp47Q8BY87 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
Usp47Q8BY87 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC20.87■□□□□ 0.93
Usp47Q8BY87 Gm27430-201ENSMUST00000184585 107 ntBASIC20.87■□□□□ 0.93
Usp47Q8BY87 Gm44333-201ENSMUST00000197168 107 ntBASIC20.87■□□□□ 0.93
Usp47Q8BY87 Gm9182-201ENSMUST00000217829 639 ntBASIC20.87■□□□□ 0.93
Usp47Q8BY87 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC20.87■□□□□ 0.93
Usp47Q8BY87 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp47Q8BY87 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.86■□□□□ 0.93
Usp47Q8BY87 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Gm13517-201ENSMUST00000120782 1495 ntBASIC20.86■□□□□ 0.93
Usp47Q8BY87 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp47Q8BY87 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp47Q8BY87 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp47Q8BY87 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp47Q8BY87 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp47Q8BY87 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp47Q8BY87 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp47Q8BY87 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp47Q8BY87 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms