Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Gm13036-201ENSMUST00000117799 748 ntBASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Trerf1Q8BXJ2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Gm11764-201ENSMUST00000120221 623 ntBASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Gm37153-201ENSMUST00000193637 231 ntBASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms