Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Gm9182-201ENSMUST00000217829 639 ntBASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scfd1Q8BRF7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Gm14767-201ENSMUST00000121559 586 ntBASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Gm27989-201ENSMUST00000184721 107 ntBASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scfd1Q8BRF7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Mir8102-201ENSMUST00000184148 139 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm29310-201ENSMUST00000185468 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21825-201ENSMUST00000185728 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm29109-201ENSMUST00000185895 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21896-201ENSMUST00000186520 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21873-201ENSMUST00000186728 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21794-201ENSMUST00000187056 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21880-201ENSMUST00000187275 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21826-201ENSMUST00000187451 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21198-201ENSMUST00000188393 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21749-201ENSMUST00000189343 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21901-201ENSMUST00000189568 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm29424-201ENSMUST00000189716 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm28599-201ENSMUST00000189838 694 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21867-201ENSMUST00000189917 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm29269-201ENSMUST00000190087 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21722-201ENSMUST00000190153 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm28423-201ENSMUST00000190701 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21899-201ENSMUST00000190745 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21910-201ENSMUST00000191163 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21849-201ENSMUST00000191571 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm28678-201ENSMUST00000191593 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm20910-201ENSMUST00000193268 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Gm21871-201ENSMUST00000194621 696 ntBASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scfd1Q8BRF7 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms