Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim50Q810I2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim50Q810I2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim50Q810I2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim50Q810I2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim50Q810I2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim50Q810I2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim50Q810I2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Trim50Q810I2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim50Q810I2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.46□□□□□ -0.09
Trim50Q810I2 Gm9727-201ENSMUST00000161387 555 ntBASIC14.46□□□□□ -0.09
Trim50Q810I2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim50Q810I2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trim50Q810I2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim50Q810I2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Trim50Q810I2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trim50Q810I2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim50Q810I2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim50Q810I2 Efs-202ENSMUST00000227037 2540 ntBASIC14.46□□□□□ -0.1
Trim50Q810I2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Trim50Q810I2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.46□□□□□ -0.1
Trim50Q810I2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim50Q810I2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim50Q810I2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim50Q810I2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trim50Q810I2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Trim50Q810I2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trim50Q810I2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim50Q810I2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim50Q810I2 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.45□□□□□ -0.1
Trim50Q810I2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.45□□□□□ -0.1
Trim50Q810I2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim50Q810I2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim50Q810I2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.45□□□□□ -0.1
Trim50Q810I2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim50Q810I2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.44□□□□□ -0.1
Trim50Q810I2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Gm5177-201ENSMUST00000183092 997 ntBASIC14.44□□□□□ -0.1
Trim50Q810I2 Gm27525-201ENSMUST00000184465 107 ntBASIC14.44□□□□□ -0.1
Trim50Q810I2 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.44□□□□□ -0.1
Trim50Q810I2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms