Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ttc28Q80XJ3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ttc28Q80XJ3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 BC001981-202ENSMUST00000191393 1545 ntBASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ttc28Q80XJ3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Gm37424-201ENSMUST00000191727 561 ntBASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Gm45098-201ENSMUST00000207179 657 ntBASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Gm15198-201ENSMUST00000117283 177 ntBASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Gm13226-201ENSMUST00000117838 404 ntBASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ttc28Q80XJ3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms