Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gm15358-201ENSMUST00000119249 520 ntBASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gm25857-201ENSMUST00000082788 129 ntBASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Gm15693-201ENSMUST00000120470 637 ntBASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38bQ80SY5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Gm20553-201ENSMUST00000204205 844 ntBASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Gm18057-201ENSMUST00000208220 503 ntBASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Prpf38bQ80SY5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms