Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx4Q7TNK1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx4Q7TNK1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rfx4Q7TNK1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx4Q7TNK1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx4Q7TNK1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx4Q7TNK1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Rfx4Q7TNK1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx4Q7TNK1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfx4Q7TNK1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Gm10013-201ENSMUST00000106074 672 ntBASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx4Q7TNK1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Gm5587-201ENSMUST00000206270 674 ntBASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms