Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cspg5Q71M36 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.42■□□□□ 0.06
Cspg5Q71M36 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg5Q71M36 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.42■□□□□ 0.06
Cspg5Q71M36 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg5Q71M36 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cspg5Q71M36 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg5Q71M36 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Rpph1-201ENSMUST00000175096 319 ntBASIC15.41■□□□□ 0.06
Cspg5Q71M36 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cspg5Q71M36 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Gm12008-201ENSMUST00000117791 755 ntBASIC15.4■□□□□ 0.06
Cspg5Q71M36 Gm16198-201ENSMUST00000118766 670 ntBASIC15.4■□□□□ 0.06
Cspg5Q71M36 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Gm27430-201ENSMUST00000184585 107 ntBASIC15.4■□□□□ 0.06
Cspg5Q71M36 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.4■□□□□ 0.06
Cspg5Q71M36 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.4■□□□□ 0.06
Cspg5Q71M36 Gm10253-201ENSMUST00000194270 940 ntBASIC15.4■□□□□ 0.06
Cspg5Q71M36 Gm44333-201ENSMUST00000197168 107 ntBASIC15.4■□□□□ 0.06
Cspg5Q71M36 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.4■□□□□ 0.06
Cspg5Q71M36 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg5Q71M36 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Gm10499-201ENSMUST00000174094 934 ntBASIC15.39■□□□□ 0.05
Cspg5Q71M36 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.39■□□□□ 0.05
Cspg5Q71M36 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.39■□□□□ 0.05
Cspg5Q71M36 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg5Q71M36 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.38■□□□□ 0.05
Cspg5Q71M36 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg5Q71M36 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg5Q71M36 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.38■□□□□ 0.05
Cspg5Q71M36 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms