Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Gm9182-201ENSMUST00000217829 639 ntBASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx55Q6ZPL9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx55Q6ZPL9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Mir6392-201ENSMUST00000184924 108 ntBASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 AA619741-201ENSMUST00000195095 646 ntBASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx55Q6ZPL9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Gm6266-201ENSMUST00000203844 806 ntBASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms