Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Gm25948-201ENSMUST00000175334 112 ntBASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.58■□□□□ 0.08
Hmgb4Q6P8W9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb4Q6P8W9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb4Q6P8W9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb4Q6P8W9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms