Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SspnQ62147 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.45□□□□□ -0.42
SspnQ62147 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SspnQ62147 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.45□□□□□ -0.42
SspnQ62147 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.45□□□□□ -0.42
SspnQ62147 Gm24589-201ENSMUST00000116692 94 ntBASIC12.45□□□□□ -0.42
SspnQ62147 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.45□□□□□ -0.42
SspnQ62147 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.45□□□□□ -0.42
SspnQ62147 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.45□□□□□ -0.42
SspnQ62147 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.45□□□□□ -0.42
SspnQ62147 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.45□□□□□ -0.42
SspnQ62147 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.45□□□□□ -0.42
SspnQ62147 Gm34391-201ENSMUST00000203706 907 ntBASIC12.45□□□□□ -0.42
SspnQ62147 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.45□□□□□ -0.42
SspnQ62147 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SspnQ62147 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.45□□□□□ -0.42
SspnQ62147 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SspnQ62147 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspnQ62147 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.44□□□□□ -0.42
SspnQ62147 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.44□□□□□ -0.42
SspnQ62147 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SspnQ62147 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SspnQ62147 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SspnQ62147 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SspnQ62147 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.44□□□□□ -0.42
SspnQ62147 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.44□□□□□ -0.42
SspnQ62147 Gm27459-201ENSMUST00000184860 107 ntBASIC12.44□□□□□ -0.42
SspnQ62147 Gm6376-201ENSMUST00000209407 580 ntBASIC12.44□□□□□ -0.42
SspnQ62147 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SspnQ62147 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.44□□□□□ -0.42
SspnQ62147 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Birc2-201ENSMUST00000054878 378 ntBASIC12.44□□□□□ -0.42
SspnQ62147 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SspnQ62147 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.44□□□□□ -0.42
SspnQ62147 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SspnQ62147 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SspnQ62147 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.44□□□□□ -0.42
SspnQ62147 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SspnQ62147 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.44□□□□□ -0.42
SspnQ62147 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspnQ62147 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.43□□□□□ -0.42
SspnQ62147 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.43□□□□□ -0.42
SspnQ62147 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.43□□□□□ -0.42
SspnQ62147 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SspnQ62147 Gm25990-201ENSMUST00000102440 86 ntBASIC12.43□□□□□ -0.42
SspnQ62147 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.43□□□□□ -0.42
SspnQ62147 Gm6089-201ENSMUST00000197666 938 ntBASIC12.43□□□□□ -0.42
SspnQ62147 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.43□□□□□ -0.42
SspnQ62147 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.43□□□□□ -0.42
SspnQ62147 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms