Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Foxd3Q61060 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Foxd3Q61060 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxd3Q61060 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxd3Q61060 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Gm15920-201ENSMUST00000118998 402 ntBASIC13.64□□□□□ -0.23
Foxd3Q61060 Gm12260-201ENSMUST00000122447 411 ntBASIC13.64□□□□□ -0.23
Foxd3Q61060 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.64□□□□□ -0.23
Foxd3Q61060 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.64□□□□□ -0.23
Foxd3Q61060 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxd3Q61060 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxd3Q61060 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.64□□□□□ -0.23
Foxd3Q61060 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxd3Q61060 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Gm23935-201ENSMUST00000102303 57 ntBASIC13.63□□□□□ -0.23
Foxd3Q61060 Gm24270-201ENSMUST00000102326 57 ntBASIC13.63□□□□□ -0.23
Foxd3Q61060 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Foxd3Q61060 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxd3Q61060 Gm24245-201ENSMUST00000157318 57 ntBASIC13.63□□□□□ -0.23
Foxd3Q61060 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Foxd3Q61060 Gm27646-201ENSMUST00000183989 110 ntBASIC13.63□□□□□ -0.23
Foxd3Q61060 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.63□□□□□ -0.23
Foxd3Q61060 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Foxd3Q61060 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Foxd3Q61060 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd3Q61060 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Foxd3Q61060 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.62□□□□□ -0.23
Foxd3Q61060 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.62□□□□□ -0.23
Foxd3Q61060 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.62□□□□□ -0.23
Foxd3Q61060 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Foxd3Q61060 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms