Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Gm7222-201ENSMUST00000117512 906 ntBASIC14.69□□□□□ -0.06
Scn2bQ56A07 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Scn2bQ56A07 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.68□□□□□ -0.06
Scn2bQ56A07 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Mir5131-201ENSMUST00000175426 93 ntBASIC14.68□□□□□ -0.06
Scn2bQ56A07 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Gm2651-201ENSMUST00000203560 838 ntBASIC14.68□□□□□ -0.06
Scn2bQ56A07 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn2bQ56A07 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.67□□□□□ -0.06
Scn2bQ56A07 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Gm5682-201ENSMUST00000173402 505 ntBASIC14.67□□□□□ -0.06
Scn2bQ56A07 Gm6550-201ENSMUST00000187574 993 ntBASIC14.67□□□□□ -0.06
Scn2bQ56A07 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.67□□□□□ -0.06
Scn2bQ56A07 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.67□□□□□ -0.06
Scn2bQ56A07 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn2bQ56A07 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms