Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc27Q3V036 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Gm9947-201ENSMUST00000067599 2920 ntBASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc27Q3V036 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc27Q3V036 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc27Q3V036 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Gm11780-201ENSMUST00000136880 516 ntBASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc27Q3V036 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms