Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
Q3U1D9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Q3U1D9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Q3U1D9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Q3U1D9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Q3U1D9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Q3U1D9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Q3U1D9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Q3U1D9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Q3U1D9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Q3U1D9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Q3U1D9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Q3U1D9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Q3U1D9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Q3U1D9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Q3U1D9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.88□□□□□ -0.35
Q3U1D9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Q3U1D9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Q3U1D9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Q3U1D9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.88□□□□□ -0.35
Q3U1D9 Gm18049-201ENSMUST00000208909 581 ntBASIC12.88□□□□□ -0.35
Q3U1D9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Gm5779-201ENSMUST00000218467 910 ntBASIC12.88□□□□□ -0.35
Q3U1D9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Q3U1D9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Q3U1D9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Q3U1D9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Q3U1D9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Q3U1D9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Q3U1D9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3U1D9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Q3U1D9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.87□□□□□ -0.35
Q3U1D9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Q3U1D9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Q3U1D9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.87□□□□□ -0.35
Q3U1D9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.87□□□□□ -0.35
Q3U1D9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.87□□□□□ -0.35
Q3U1D9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Q3U1D9 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.87□□□□□ -0.35
Q3U1D9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.87□□□□□ -0.35
Q3U1D9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.87□□□□□ -0.35
Q3U1D9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.87□□□□□ -0.35
Q3U1D9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Q3U1D9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.87□□□□□ -0.35
Q3U1D9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.87□□□□□ -0.35
Q3U1D9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Q3U1D9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3U1D9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms