Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.13■□□□□ 0.01
Thumpd3P97770 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.13■□□□□ 0.01
Thumpd3P97770 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.13■□□□□ 0.01
Thumpd3P97770 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Thumpd3P97770 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Thumpd3P97770 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Thumpd3P97770 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd3P97770 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Gm7230-201ENSMUST00000173026 815 ntBASIC15.12■□□□□ 0.01
Thumpd3P97770 Mir5126-201ENSMUST00000175513 77 ntBASIC15.12■□□□□ 0.01
Thumpd3P97770 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.12■□□□□ 0.01
Thumpd3P97770 Gm8655-201ENSMUST00000221159 852 ntBASIC15.12■□□□□ 0.01
Thumpd3P97770 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.12■□□□□ 0.01
Thumpd3P97770 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd3P97770 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.12■□□□□ 0.01
Thumpd3P97770 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd3P97770 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.11■□□□□ 0.01
Thumpd3P97770 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.11■□□□□ 0.01
Thumpd3P97770 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd3P97770 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd3P97770 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms