Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nkx3-2P97503 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.04□□□□□ -0.16
Nkx3-2P97503 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Grk6-207ENSMUST00000225925 2769 ntBASIC14.04□□□□□ -0.16
Nkx3-2P97503 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Gm20553-201ENSMUST00000204205 844 ntBASIC14.04□□□□□ -0.16
Nkx3-2P97503 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.04□□□□□ -0.16
Nkx3-2P97503 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.04□□□□□ -0.16
Nkx3-2P97503 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.04□□□□□ -0.16
Nkx3-2P97503 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.04□□□□□ -0.16
Nkx3-2P97503 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx3-2P97503 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Nkx3-2P97503 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.03□□□□□ -0.16
Nkx3-2P97503 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx3-2P97503 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx3-2P97503 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx3-2P97503 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.02□□□□□ -0.17
Nkx3-2P97503 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Rprl2-201ENSMUST00000157150 290 ntBASIC14.02□□□□□ -0.17
Nkx3-2P97503 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms