Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm18101-201ENSMUST00000215769 548 ntBASIC12.48□□□□□ -0.41
Npas1P97459 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.48□□□□□ -0.41
Npas1P97459 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.48□□□□□ -0.41
Npas1P97459 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Npas1P97459 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Npas1P97459 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Npas1P97459 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.47□□□□□ -0.41
Npas1P97459 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.47□□□□□ -0.41
Npas1P97459 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Npas1P97459 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.47□□□□□ -0.41
Npas1P97459 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.47□□□□□ -0.41
Npas1P97459 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.47□□□□□ -0.41
Npas1P97459 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Npas1P97459 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.47□□□□□ -0.41
Npas1P97459 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Npas1P97459 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.47□□□□□ -0.41
Npas1P97459 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.47□□□□□ -0.41
Npas1P97459 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.47□□□□□ -0.41
Npas1P97459 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.47□□□□□ -0.41
Npas1P97459 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.47□□□□□ -0.41
Npas1P97459 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Npas1P97459 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.47□□□□□ -0.41
Npas1P97459 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Npas1P97459 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Npas1P97459 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.47□□□□□ -0.41
Npas1P97459 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Npas1P97459 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Npas1P97459 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.46□□□□□ -0.41
Npas1P97459 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.46□□□□□ -0.41
Npas1P97459 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Npas1P97459 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Npas1P97459 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Npas1P97459 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.46□□□□□ -0.41
Npas1P97459 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Npas1P97459 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Npas1P97459 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Npas1P97459 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Npas1P97459 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Npas1P97459 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Npas1P97459 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Npas1P97459 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Npas1P97459 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Npas1P97459 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Npas1P97459 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms