Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.24□□□□□ -0.29
SgcbP82349 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.24□□□□□ -0.29
SgcbP82349 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SgcbP82349 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SgcbP82349 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SgcbP82349 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.24□□□□□ -0.29
SgcbP82349 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.24□□□□□ -0.29
SgcbP82349 Gm25911-201ENSMUST00000157621 56 ntBASIC13.24□□□□□ -0.29
SgcbP82349 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SgcbP82349 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.24□□□□□ -0.29
SgcbP82349 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.24□□□□□ -0.29
SgcbP82349 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.23□□□□□ -0.29
SgcbP82349 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SgcbP82349 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
SgcbP82349 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Gm4995-201ENSMUST00000117247 432 ntBASIC13.23□□□□□ -0.29
SgcbP82349 Gm9385-201ENSMUST00000117563 472 ntBASIC13.23□□□□□ -0.29
SgcbP82349 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.23□□□□□ -0.29
SgcbP82349 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
SgcbP82349 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.23□□□□□ -0.29
SgcbP82349 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.23□□□□□ -0.29
SgcbP82349 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.23□□□□□ -0.29
SgcbP82349 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.23□□□□□ -0.29
SgcbP82349 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SgcbP82349 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.23□□□□□ -0.29
SgcbP82349 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SgcbP82349 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.23□□□□□ -0.29
SgcbP82349 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcbP82349 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SgcbP82349 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SgcbP82349 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Gm11025-201ENSMUST00000140773 466 ntBASIC13.22□□□□□ -0.29
SgcbP82349 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.22□□□□□ -0.29
SgcbP82349 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.22□□□□□ -0.29
SgcbP82349 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SgcbP82349 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.22□□□□□ -0.29
SgcbP82349 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SgcbP82349 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SgcbP82349 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.22□□□□□ -0.29
SgcbP82349 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
SgcbP82349 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcbP82349 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SgcbP82349 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SgcbP82349 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms