Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shox2P70390 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Shox2P70390 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shox2P70390 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.68□□□□□ -0.06
Shox2P70390 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shox2P70390 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.68□□□□□ -0.06
Shox2P70390 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.68□□□□□ -0.06
Shox2P70390 Gm9172-201ENSMUST00000212092 954 ntBASIC14.68□□□□□ -0.06
Shox2P70390 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.68□□□□□ -0.06
Shox2P70390 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.68□□□□□ -0.06
Shox2P70390 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shox2P70390 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shox2P70390 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Shox2P70390 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.67□□□□□ -0.06
Shox2P70390 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shox2P70390 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shox2P70390 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Shox2P70390 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shox2P70390 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shox2P70390 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.67□□□□□ -0.06
Shox2P70390 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shox2P70390 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.66□□□□□ -0.06
Shox2P70390 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Shox2P70390 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Shox2P70390 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Shox2P70390 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.66□□□□□ -0.06
Shox2P70390 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.66□□□□□ -0.06
Shox2P70390 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.66□□□□□ -0.06
Shox2P70390 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.66□□□□□ -0.06
Shox2P70390 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Shox2P70390 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Shox2P70390 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.66□□□□□ -0.06
Shox2P70390 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Shox2P70390 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.66□□□□□ -0.06
Shox2P70390 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.66□□□□□ -0.06
Shox2P70390 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Shox2P70390 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shox2P70390 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Shox2P70390 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.65□□□□□ -0.06
Shox2P70390 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Shox2P70390 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Shox2P70390 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms