Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Lsm6P62313 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm6P62313 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm6P62313 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.02□□□□□ -0.33
Lsm6P62313 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.02□□□□□ -0.33
Lsm6P62313 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.02□□□□□ -0.33
Lsm6P62313 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.02□□□□□ -0.33
Lsm6P62313 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsm6P62313 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm6P62313 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.02□□□□□ -0.33
Lsm6P62313 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm6P62313 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm6P62313 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.01□□□□□ -0.33
Lsm6P62313 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm6P62313 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm6P62313 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm6P62313 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm6P62313 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Lsm6P62313 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Lsm6P62313 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
Lsm6P62313 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm6P62313 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13□□□□□ -0.33
Lsm6P62313 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13□□□□□ -0.33
Lsm6P62313 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms