Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm44359-201ENSMUST00000200671 138 ntBASIC14.24□□□□□ -0.13
Cdkn2bP55271 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdkn2bP55271 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Gm6089-201ENSMUST00000197666 938 ntBASIC14.23□□□□□ -0.13
Cdkn2bP55271 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.23□□□□□ -0.13
Cdkn2bP55271 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.23□□□□□ -0.13
Cdkn2bP55271 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn2bP55271 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.22□□□□□ -0.13
Cdkn2bP55271 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn2bP55271 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cdkn2bP55271 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdkn2bP55271 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn2bP55271 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn2bP55271 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn2bP55271 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Cdkn2bP55271 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn2bP55271 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn2bP55271 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms