Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ercc3P49135 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.63■□□□□ 0.41
Ercc3P49135 Gm2213-201ENSMUST00000197485 688 ntBASIC17.63■□□□□ 0.41
Ercc3P49135 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.63■□□□□ 0.41
Ercc3P49135 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ercc3P49135 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.63■□□□□ 0.41
Ercc3P49135 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ercc3P49135 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.62■□□□□ 0.41
Ercc3P49135 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.62■□□□□ 0.41
Ercc3P49135 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.62■□□□□ 0.41
Ercc3P49135 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ercc3P49135 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ercc3P49135 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Gm43575-201ENSMUST00000196420 516 ntBASIC17.62■□□□□ 0.41
Ercc3P49135 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ercc3P49135 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.62■□□□□ 0.41
Ercc3P49135 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc3P49135 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ercc3P49135 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ercc3P49135 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Ercc3P49135 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
Ercc3P49135 Gm24513-201ENSMUST00000174964 138 ntBASIC17.61■□□□□ 0.41
Ercc3P49135 Rpph1-201ENSMUST00000175096 319 ntBASIC17.61■□□□□ 0.41
Ercc3P49135 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.61■□□□□ 0.41
Ercc3P49135 Gm27397-201ENSMUST00000184997 107 ntBASIC17.61■□□□□ 0.41
Ercc3P49135 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.61■□□□□ 0.41
Ercc3P49135 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.61■□□□□ 0.41
Ercc3P49135 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.61■□□□□ 0.41
Ercc3P49135 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Ercc3P49135 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ercc3P49135 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc3P49135 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.6■□□□□ 0.41
Ercc3P49135 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.6■□□□□ 0.41
Ercc3P49135 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.6■□□□□ 0.41
Ercc3P49135 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.6■□□□□ 0.41
Ercc3P49135 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.6■□□□□ 0.41
Ercc3P49135 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Ercc3P49135 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc3P49135 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms